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Engineering of serine protease for improved thermostability and catalytic
activity using rational design

Research Authors
Naeem Mahmood Ashraf, Akshaya Krishnagopal, Aadil Hussain, David Kastner,
Ahmed Mahmoud Mohammed Sayed , Yu-KeungMok, KunchithapadamSwaminathan , Nadia Zeeshan
Research Abstract

The study involves the isolation and characterization of a serine peptidase, named SP, from Pseudomonas
aeruginosa. In addition to basic characterization, the protein was engineered, by site-directed mutagenesis of selected
non-catalytic residues, to increase its thermal stability and catalytic activity. Among the eight-point mutations,
predicted by FireProt, two mutants, A29G and V336I, yielded a positive impact. The Tm of A29G and V336I
showed an increase by 5 °C and also a substantial increase in residual activity of the enzyme at elevated temperature.
Moreover, the catalytic activity of A29G and V336I also showed an increase of 1.4-fold activity, compared to
the wild-type (WT). Moreover, molecular docking simulations also predicted better substrate affinity of themutants.
Wehave also performed molecular dynamics (MD) simulations at 315 and 345 K, and theMDdata at 345 K
demonstrates improved thermostability for the mutants, compared to theWT. Our findings not only contribute
to a better understanding of the structure-stability-activity relationship of SP but also highlights, that modification
of non-catalytic residues could also promote favourable catalytic behaviour.

Research Department
Research Journal
International Journal of Biological Macromolecules
Research Publisher
Elsevier
Research Rank
1
Research Vol
NULL
Research Website
NULL
Research Year
2018
Research Pages
NULL